Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905877.1_cds_XP_016456141.1_50007
CDS Infomation

[gene=LOC107780136] [db_xref=GeneID:107780136] [protein=plant intracellular Ras-group-related LRR protein 6-like isoform X2] [protein_id=XP_016456141.1] [location=join(37643..37707,40284..40347,40454..40590,40703..40789,40867..40942,42243..42317,42409..42478,42575..42652,42775..42835,42970..43048,43259..43349,43677..43737,43837..43904,43990..44051,45104..45241,45922..46026,47296..47420,47498..47594,47675..47749,48534..48589,49064..49139)] [gbkey=CDS]
Sequence

ATGGATCGAGTGCTGAAAGCTGCGAGAACTTCCGGTTCTCTCAACTTATCAAATCGCTCT
CTCAGTGAGGTGCCCAATGATGTATACAAAAGTTTGGATGCAGCCAGTGAGGACGAGAAG
TGGTGGGAGGCCGTGGAGCTACAGAAGCTGATTTTGGCTCATAACAACATAGAAACATTG
AAGGAAGATCTTCGAAATTTACCTCTACTGTCGGTGCTTAATGTCAGTCACAACAAGCTA
ACCTGTCTTCCAGCGGCTATTGGAGAGCTTCACATGCTAAAGTCCTTAGATGTATCATTT
AACTTGATAGTGAACATTCCAGAAGAGATCGGAACAGCAGCTTCTCTAGTCAAGTTTGAT
TGTTCAAACAACAAACTAAATGATCTCCCTAACTCCCTTGGAGGATGCGTGGAGTTATCA
GACCTCAAGGCATCAAACAATAGCATTTCCAGTTTGCCAGGAGATCTAGCGAAGTGTTCA
AAATTAACAAAGTTGGATGTTGAGGGAAACAAGTTAGCTATGCTTCCTGAGAGTTTGATT
TCATCATGCAGAATGCTTACTGAACTCAATGCATCGAAAAACTTGCTCAATAACATTCCA
GAGAATGTAGGAAGCCTTTCACGCTTGATTCGCCTAGACCTTCATCAGAACAGAATTTCA
TCAATTCCATCCTCAATAAAGGATTGCTCATCTCTTTTGGAGTTTTATATGGGGAATAAT
GCACTTGTTTCATTACCTGTGGAGATAGGTGCACTTAATAGGTTGGGGATATTTGATCTC
CACTCAAACCAGTTAAAGGAGTACCCAGTGGAGGCATGTAAATTGCAACTTTCAATGCTG
GACTTATCTAACAATTCATTGTCTGGATTGCCTCCAGATATTGGCTTAATGACAACTTTG
CGGAAGCTTCTGCTTATTGGCAACCCTATTAGAACACTTCGGAGCTCGTTGGTAAATGGA
CCTACACCTGCTCTATTAAAATTTCTTCGAAGTAGAATTCCAACTGATGAAGCTGCTACG
CCCGGAAAGGAGGATGTTATTGCCATGGCAGCTAGGCTGTCCCTGTCTTCAAAGGAGCTT
TCTTTAGGAGGATTTGGTTTGACGGCTGTCCCTTCAGATGTCTGGAAGTCACGAGACATC
TCAAAATGTGATCTTTCAGGGAACTCAATCGAAGAACTTCCTCTTGAACTTTGCTCTTGT
ATTTCCTTGGAGACTCTCATTTTATCCAAAAACAAGATAAAAGATTGGCCTGGTTCAGTC
TTAACATCACTTCCTGCACTTACATGTTTGAAGCTAGACAATAATCCCCTCAGACAGATA
CCATCCTCTGCATTTCAAGTTGTATCCAAGCTTCAGGTTCTGGATTTGAGTGGAAATATA
GGTTCTTTACCAGAGCATCCTGCATTTTCTTGCCTACCAGAGTTGCAAGAGCTTTATTTG
AGAAGGATGCAAATATCTATTTTCCCAAGTGATATAATTAACTTAAAGCAGTTACGCATT
CTTGATTTGAGCCAAAATTCCCTTCAATCAATTCCACAGGTTATAGTAAACTTGGGTTCT
CTCACTGAACTCGACCTGTCAGACAATAACATTTCTTCTCTTCCACCAGAATTGGGTTTG
CTTGAACCTAGTTTGCAGGTGCTAAGACTGGATGGTAACCCACTTCGAAGCATCCGAAGG
CCCATTTTGGATCGAGGAACAAAAGCTGTTTTGAAGTACTTGAAGGAGAGAATTGTGGAG
CATTAG

Peptide Sequence

PEP ID

XP_016456141.1
PEP Infomation

PREDICTED: plant intracellular Ras-group-related LRR protein 6-like isoform X2 [Nicotiana tabacum]
Sequence

MDRVLKAARTSGSLNLSNRSLSEVPNDVYKSLDAASEDEKWWEAVELQKLILAHNNIETL
KEDLRNLPLLSVLNVSHNKLTCLPAAIGELHMLKSLDVSFNLIVNIPEEIGTAASLVKFD
CSNNKLNDLPNSLGGCVELSDLKASNNSISSLPGDLAKCSKLTKLDVEGNKLAMLPESLI
SSCRMLTELNASKNLLNNIPENVGSLSRLIRLDLHQNRISSIPSSIKDCSSLLEFYMGNN
ALVSLPVEIGALNRLGIFDLHSNQLKEYPVEACKLQLSMLDLSNNSLSGLPPDIGLMTTL
RKLLLIGNPIRTLRSSLVNGPTPALLKFLRSRIPTDEAATPGKEDVIAMAARLSLSSKEL
SLGGFGLTAVPSDVWKSRDISKCDLSGNSIEELPLELCSCISLETLILSKNKIKDWPGSV
LTSLPALTCLKLDNNPLRQIPSSAFQVVSKLQVLDLSGNIGSLPEHPAFSCLPELQELYL
RRMQISIFPSDIINLKQLRILDLSQNSLQSIPQVIVNLGSLTELDLSDNNISSLPPELGL
LEPSLQVLRLDGNPLRSIRRPILDRGTKAVLKYLKERIVEH

Transcript Sequence

Gene sequence data has not been registered.